Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Gm13036-201ENSMUST00000117799 748 ntBASIC11.39□□□□□ -0.59
SgcaP82350 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SgcaP82350 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SgcaP82350 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
SgcaP82350 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
SgcaP82350 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.39□□□□□ -0.59
SgcaP82350 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.39□□□□□ -0.59
SgcaP82350 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.39□□□□□ -0.59
SgcaP82350 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcaP82350 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SgcaP82350 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcaP82350 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Pck2-205ENSMUST00000226352 2784 ntBASIC11.38□□□□□ -0.59
SgcaP82350 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Gm13597-201ENSMUST00000121239 375 ntBASIC11.38□□□□□ -0.59
SgcaP82350 Gm7862-201ENSMUST00000121461 292 ntBASIC11.38□□□□□ -0.59
SgcaP82350 Gm2445-201ENSMUST00000182798 989 ntBASIC11.38□□□□□ -0.59
SgcaP82350 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.38□□□□□ -0.59
SgcaP82350 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.38□□□□□ -0.59
SgcaP82350 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.38□□□□□ -0.59
SgcaP82350 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SgcaP82350 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SgcaP82350 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcaP82350 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcaP82350 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcaP82350 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcaP82350 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SgcaP82350 Gm27301-201ENSMUST00000184012 127 ntBASIC11.37□□□□□ -0.59
SgcaP82350 Gm17971-201ENSMUST00000190239 806 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms