Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.98□□□□□ -0.01
Hmgb1P63158 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.98□□□□□ -0.01
Hmgb1P63158 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm27680-201ENSMUST00000184192 160 ntBASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm37935-201ENSMUST00000192012 982 ntBASIC14.98□□□□□ -0.01
Hmgb1P63158 Gm44344-201ENSMUST00000200287 129 ntBASIC14.98□□□□□ -0.01
Hmgb1P63158 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Grk6-205ENSMUST00000224653 2976 ntBASIC14.98□□□□□ -0.01
Hmgb1P63158 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hmgb1P63158 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb1P63158 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gm14701-201ENSMUST00000117156 348 ntBASIC14.97□□□□□ -0.01
Hmgb1P63158 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gm27321-201ENSMUST00000185021 205 ntBASIC14.97□□□□□ -0.01
Hmgb1P63158 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.97□□□□□ -0.01
Hmgb1P63158 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb1P63158 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb1P63158 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm23935-201ENSMUST00000102303 57 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm24270-201ENSMUST00000102326 57 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm24245-201ENSMUST00000157318 57 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm22175-201ENSMUST00000175007 78 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm43575-201ENSMUST00000196420 516 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms