Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lhx1P63006 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.33□□□□□ -0.28
Lhx1P63006 Gm11814-201ENSMUST00000119515 929 ntBASIC13.33□□□□□ -0.28
Lhx1P63006 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.33□□□□□ -0.28
Lhx1P63006 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.33□□□□□ -0.28
Lhx1P63006 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.33□□□□□ -0.28
Lhx1P63006 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.33□□□□□ -0.28
Lhx1P63006 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Itm2b-204ENSMUST00000228637 783 ntBASIC13.33□□□□□ -0.28
Lhx1P63006 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.33□□□□□ -0.28
Lhx1P63006 Gm26315-201ENSMUST00000083890 321 ntBASIC13.33□□□□□ -0.28
Lhx1P63006 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Lhx1P63006 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx1P63006 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Lhx1P63006 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Lhx1P63006 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.32□□□□□ -0.28
Lhx1P63006 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm13612-201ENSMUST00000119276 390 ntBASIC13.32□□□□□ -0.28
Lhx1P63006 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm6152-201ENSMUST00000151704 340 ntBASIC13.32□□□□□ -0.28
Lhx1P63006 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm17150-201ENSMUST00000165577 381 ntBASIC13.32□□□□□ -0.28
Lhx1P63006 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lhx1P63006 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Lhx1P63006 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Lhx1P63006 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx1P63006 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.31□□□□□ -0.28
Lhx1P63006 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Gm4984-201ENSMUST00000115987 360 ntBASIC13.31□□□□□ -0.28
Lhx1P63006 Gm5687-201ENSMUST00000118252 640 ntBASIC13.31□□□□□ -0.28
Lhx1P63006 Gm15824-201ENSMUST00000119516 955 ntBASIC13.31□□□□□ -0.28
Lhx1P63006 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lhx1P63006 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.31□□□□□ -0.28
Lhx1P63006 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.31□□□□□ -0.28
Lhx1P63006 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lhx1P63006 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.31□□□□□ -0.28
Lhx1P63006 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx1P63006 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms