Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.06□□□□□ -0.48
Sf3b6P59708 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm23935-201ENSMUST00000102303 57 ntBASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm24270-201ENSMUST00000102326 57 ntBASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.06□□□□□ -0.48
Sf3b6P59708 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm24245-201ENSMUST00000157318 57 ntBASIC12.06□□□□□ -0.48
Sf3b6P59708 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm37714-201ENSMUST00000194742 342 ntBASIC12.06□□□□□ -0.48
Sf3b6P59708 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.06□□□□□ -0.48
Sf3b6P59708 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sf3b6P59708 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.05□□□□□ -0.48
Sf3b6P59708 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.05□□□□□ -0.48
Sf3b6P59708 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.05□□□□□ -0.48
Sf3b6P59708 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Sf3b6P59708 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sf3b6P59708 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b6P59708 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b6P59708 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sf3b6P59708 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b6P59708 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3b6P59708 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.04□□□□□ -0.48
Sf3b6P59708 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b6P59708 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms