Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Nup43P59235 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Gm26464-201ENSMUST00000157094 305 ntBASIC12.84□□□□□ -0.35
Nup43P59235 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup43P59235 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nup43P59235 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Mir6392-201ENSMUST00000184924 108 ntBASIC12.84□□□□□ -0.35
Nup43P59235 Gm18624-201ENSMUST00000220966 658 ntBASIC12.84□□□□□ -0.35
Nup43P59235 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.84□□□□□ -0.35
Nup43P59235 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup43P59235 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup43P59235 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.83□□□□□ -0.36
Nup43P59235 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.83□□□□□ -0.36
Nup43P59235 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Gm12341-201ENSMUST00000119724 503 ntBASIC12.83□□□□□ -0.36
Nup43P59235 Gm15376-201ENSMUST00000122258 783 ntBASIC12.83□□□□□ -0.36
Nup43P59235 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup43P59235 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.83□□□□□ -0.36
Nup43P59235 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.83□□□□□ -0.36
Nup43P59235 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup43P59235 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup43P59235 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup43P59235 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup43P59235 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup43P59235 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup43P59235 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.82□□□□□ -0.36
Nup43P59235 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.82□□□□□ -0.36
Nup43P59235 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.82□□□□□ -0.36
Nup43P59235 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nup43P59235 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.82□□□□□ -0.36
Nup43P59235 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Gm5161-201ENSMUST00000075243 853 ntBASIC12.82□□□□□ -0.36
Nup43P59235 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.82□□□□□ -0.36
Nup43P59235 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup43P59235 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms