Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tubgcp3P58854 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Tubgcp3P58854 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tubgcp3P58854 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tubgcp3P58854 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.89□□□□□ -0.19
Tubgcp3P58854 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.89□□□□□ -0.19
Tubgcp3P58854 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.89□□□□□ -0.19
Tubgcp3P58854 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.88□□□□□ -0.19
Tubgcp3P58854 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Gm27989-201ENSMUST00000184721 107 ntBASIC13.88□□□□□ -0.19
Tubgcp3P58854 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.88□□□□□ -0.19
Tubgcp3P58854 Gm44872-201ENSMUST00000207864 420 ntBASIC13.88□□□□□ -0.19
Tubgcp3P58854 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.88□□□□□ -0.19
Tubgcp3P58854 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.88□□□□□ -0.19
Tubgcp3P58854 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tubgcp3P58854 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.87□□□□□ -0.19
Tubgcp3P58854 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.87□□□□□ -0.19
Tubgcp3P58854 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.87□□□□□ -0.19
Tubgcp3P58854 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.87□□□□□ -0.19
Tubgcp3P58854 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms