Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gm8097-201ENSMUST00000117903 829 ntBASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gm45098-201ENSMUST00000207179 657 ntBASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gm6296-201ENSMUST00000222599 943 ntBASIC10.58□□□□□ -0.72
Ctdsp1P58466 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ctdsp1P58466 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.57□□□□□ -0.72
Ctdsp1P58466 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.57□□□□□ -0.72
Ctdsp1P58466 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Gm15794-201ENSMUST00000120182 631 ntBASIC10.57□□□□□ -0.72
Ctdsp1P58466 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.57□□□□□ -0.72
Ctdsp1P58466 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ctdsp1P58466 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ctdsp1P58466 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm7889-201ENSMUST00000185591 958 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 Gm9682-201ENSMUST00000197505 556 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms