Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sssca1P56873 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sssca1P56873 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sssca1P56873 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sssca1P56873 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sssca1P56873 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.97□□□□□ -0.65
Sssca1P56873 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.97□□□□□ -0.65
Sssca1P56873 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.97□□□□□ -0.65
Sssca1P56873 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Sssca1P56873 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sssca1P56873 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.97□□□□□ -0.65
Sssca1P56873 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.97□□□□□ -0.65
Sssca1P56873 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sssca1P56873 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.97□□□□□ -0.65
Sssca1P56873 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sssca1P56873 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.97□□□□□ -0.65
Sssca1P56873 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Sssca1P56873 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sssca1P56873 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sssca1P56873 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sssca1P56873 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.96□□□□□ -0.65
Sssca1P56873 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Mir698-201ENSMUST00000102164 109 ntBASIC10.96□□□□□ -0.65
Sssca1P56873 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.96□□□□□ -0.65
Sssca1P56873 Gm11745-201ENSMUST00000121669 448 ntBASIC10.96□□□□□ -0.65
Sssca1P56873 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.96□□□□□ -0.65
Sssca1P56873 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.96□□□□□ -0.65
Sssca1P56873 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.96□□□□□ -0.65
Sssca1P56873 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sssca1P56873 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.96□□□□□ -0.65
Sssca1P56873 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.96□□□□□ -0.66
Sssca1P56873 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Sssca1P56873 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.96□□□□□ -0.66
Sssca1P56873 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sssca1P56873 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sssca1P56873 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sssca1P56873 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms