Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Sox1P53783 Gm12363-201ENSMUST00000122250 668 ntBASIC13.81□□□□□ -0.2
Sox1P53783 Gm2231-201ENSMUST00000125661 612 ntBASIC13.81□□□□□ -0.2
Sox1P53783 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox1P53783 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox1P53783 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox1P53783 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.81□□□□□ -0.2
Sox1P53783 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox1P53783 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox1P53783 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox1P53783 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox1P53783 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox1P53783 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.8□□□□□ -0.2
Sox1P53783 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sox1P53783 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sox1P53783 Gm10434-201ENSMUST00000101158 471 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sox1P53783 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Gm26361-201ENSMUST00000158868 186 ntBASIC13.8□□□□□ -0.2
Sox1P53783 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Gm9555-201ENSMUST00000200908 583 ntBASIC13.8□□□□□ -0.2
Sox1P53783 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox1P53783 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.8□□□□□ -0.2
Sox1P53783 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox1P53783 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Gm16372-201ENSMUST00000073088 450 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox1P53783 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.8□□□□□ -0.2
Sox1P53783 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox1P53783 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox1P53783 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox1P53783 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.79□□□□□ -0.2
Sox1P53783 Gm11340-201ENSMUST00000119226 412 ntBASIC13.79□□□□□ -0.2
Sox1P53783 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.79□□□□□ -0.2
Sox1P53783 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.79□□□□□ -0.2
Sox1P53783 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.79□□□□□ -0.2
Sox1P53783 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox1P53783 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox1P53783 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Sox1P53783 Gm7600-201ENSMUST00000209657 785 ntBASIC13.79□□□□□ -0.2
Sox1P53783 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.79□□□□□ -0.2
Sox1P53783 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.79□□□□□ -0.2
Sox1P53783 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox1P53783 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Sox1P53783 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox1P53783 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox1P53783 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms