Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox6P40645 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sox6P40645 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.78□□□□□ -0.36
Sox6P40645 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 AA619741-201ENSMUST00000195095 646 ntBASIC12.78□□□□□ -0.36
Sox6P40645 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox6P40645 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox6P40645 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox6P40645 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.77□□□□□ -0.36
Sox6P40645 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox6P40645 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.77□□□□□ -0.37
Sox6P40645 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.77□□□□□ -0.37
Sox6P40645 Gm12882-201ENSMUST00000121696 517 ntBASIC12.77□□□□□ -0.37
Sox6P40645 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Gm27631-201ENSMUST00000184163 466 ntBASIC12.77□□□□□ -0.37
Sox6P40645 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Gm45453-201ENSMUST00000211758 853 ntBASIC12.77□□□□□ -0.37
Sox6P40645 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.77□□□□□ -0.37
Sox6P40645 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.77□□□□□ -0.37
Sox6P40645 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Sox6P40645 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox6P40645 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Sox6P40645 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox6P40645 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox6P40645 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox6P40645 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms