Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cd9P40240 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.39□□□□□ -0.27
Cd9P40240 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.39□□□□□ -0.27
Cd9P40240 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cd9P40240 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cd9P40240 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cd9P40240 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.39□□□□□ -0.27
Cd9P40240 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.39□□□□□ -0.27
Cd9P40240 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.39□□□□□ -0.27
Cd9P40240 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cd9P40240 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cd9P40240 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cd9P40240 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cd9P40240 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.38□□□□□ -0.27
Cd9P40240 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cd9P40240 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Cd9P40240 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.38□□□□□ -0.27
Cd9P40240 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Cd9P40240 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.38□□□□□ -0.27
Cd9P40240 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.38□□□□□ -0.27
Cd9P40240 Gm7730-201ENSMUST00000212486 454 ntBASIC13.38□□□□□ -0.27
Cd9P40240 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.38□□□□□ -0.27
Cd9P40240 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cd9P40240 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cd9P40240 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cd9P40240 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cd9P40240 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cd9P40240 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Gm16215-201ENSMUST00000161990 637 ntBASIC13.37□□□□□ -0.27
Cd9P40240 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.37□□□□□ -0.27
Cd9P40240 Gm28631-201ENSMUST00000190740 334 ntBASIC13.37□□□□□ -0.27
Cd9P40240 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.37□□□□□ -0.27
Cd9P40240 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd9P40240 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.37□□□□□ -0.27
Cd9P40240 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd9P40240 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd9P40240 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms