Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.91□□□□□ -0.18
Cxcl12P40224 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.9□□□□□ -0.18
Cxcl12P40224 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.9□□□□□ -0.18
Cxcl12P40224 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.9□□□□□ -0.18
Cxcl12P40224 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.9□□□□□ -0.18
Cxcl12P40224 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.9□□□□□ -0.18
Cxcl12P40224 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cxcl12P40224 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl12P40224 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cxcl12P40224 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cxcl12P40224 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cxcl12P40224 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Cxcl12P40224 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cxcl12P40224 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.89□□□□□ -0.19
Cxcl12P40224 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.89□□□□□ -0.19
Cxcl12P40224 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm7857-201ENSMUST00000117957 358 ntBASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.89□□□□□ -0.19
Cxcl12P40224 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm13316-201ENSMUST00000140537 691 ntBASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm38317-201ENSMUST00000195564 343 ntBASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm43378-201ENSMUST00000199336 582 ntBASIC13.89□□□□□ -0.19
Cxcl12P40224 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.89□□□□□ -0.19
Cxcl12P40224 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl12P40224 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.88□□□□□ -0.19
Cxcl12P40224 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.88□□□□□ -0.19
Cxcl12P40224 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cxcl12P40224 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms