Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.63□□□□□ -0.39
Hoxc5P32043 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.63□□□□□ -0.39
Hoxc5P32043 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.63□□□□□ -0.39
Hoxc5P32043 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc5P32043 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc5P32043 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc5P32043 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Gm27430-201ENSMUST00000184585 107 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 Gm21470-201ENSMUST00000187680 696 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 Gm44333-201ENSMUST00000197168 107 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Gm6888-201ENSMUST00000221983 706 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 Gm9229-201ENSMUST00000222777 126 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.62□□□□□ -0.39
Hoxc5P32043 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxc5P32043 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxc5P32043 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc5P32043 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hoxc5P32043 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc5P32043 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.61□□□□□ -0.39
Hoxc5P32043 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Gm15653-201ENSMUST00000119247 907 ntBASIC12.61□□□□□ -0.39
Hoxc5P32043 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Gm17837-201ENSMUST00000186435 985 ntBASIC12.61□□□□□ -0.39
Hoxc5P32043 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms