Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.53□□□□□ -0.24
Nckap1P28660 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.53□□□□□ -0.24
Nckap1P28660 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Nckap1P28660 Gm17330-201ENSMUST00000221047 165 ntBASIC13.53□□□□□ -0.24
Nckap1P28660 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.53□□□□□ -0.24
Nckap1P28660 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.53□□□□□ -0.24
Nckap1P28660 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nckap1P28660 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nckap1P28660 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nckap1P28660 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.52□□□□□ -0.24
Nckap1P28660 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nckap1P28660 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nckap1P28660 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nckap1P28660 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.52□□□□□ -0.25
Nckap1P28660 Gm6152-201ENSMUST00000151704 340 ntBASIC13.52□□□□□ -0.25
Nckap1P28660 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Gm27731-201ENSMUST00000185192 107 ntBASIC13.52□□□□□ -0.25
Nckap1P28660 Gm38144-201ENSMUST00000192790 465 ntBASIC13.52□□□□□ -0.25
Nckap1P28660 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.52□□□□□ -0.25
Nckap1P28660 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nckap1P28660 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.52□□□□□ -0.25
Nckap1P28660 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nckap1P28660 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nckap1P28660 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nckap1P28660 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nckap1P28660 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nckap1P28660 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nckap1P28660 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.51□□□□□ -0.25
Nckap1P28660 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Gm24644-201ENSMUST00000157114 139 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Snora78-201ENSMUST00000158630 128 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.51□□□□□ -0.25
Nckap1P28660 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Nckap1P28660 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.51□□□□□ -0.25
Nckap1P28660 Itm2b-204ENSMUST00000228637 783 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nckap1P28660 Gm10012-201ENSMUST00000078252 192 ntBASIC13.51□□□□□ -0.25
Nckap1P28660 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.51□□□□□ -0.25
Nckap1P28660 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nckap1P28660 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nckap1P28660 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.5□□□□□ -0.25
Nckap1P28660 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nckap1P28660 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms