Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfrsf1bP25119 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfrsf1bP25119 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfrsf1bP25119 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfrsf1bP25119 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm23984-201ENSMUST00000157139 203 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm18018-201ENSMUST00000198273 408 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm18307-201ENSMUST00000206864 949 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfrsf1bP25119 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Gm11434-201ENSMUST00000122379 629 ntBASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfrsf1bP25119 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms