Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.73□□□□□ -0.37
Clk1P22518 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.73□□□□□ -0.37
Clk1P22518 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.73□□□□□ -0.37
Clk1P22518 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Clk1P22518 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Clk1P22518 Gm12585-201ENSMUST00000117307 290 ntBASIC12.73□□□□□ -0.37
Clk1P22518 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.73□□□□□ -0.37
Clk1P22518 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.73□□□□□ -0.37
Clk1P22518 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clk1P22518 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.73□□□□□ -0.37
Clk1P22518 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.73□□□□□ -0.37
Clk1P22518 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clk1P22518 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Clk1P22518 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clk1P22518 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Gm15460-201ENSMUST00000118147 391 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.72□□□□□ -0.37
Clk1P22518 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clk1P22518 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Mir6956-201ENSMUST00000183598 62 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Gm27306-201ENSMUST00000183970 107 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.72□□□□□ -0.37
Clk1P22518 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Gm44719-201ENSMUST00000206404 149 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Gm46209-201ENSMUST00000217912 553 ntBASIC12.72□□□□□ -0.37
Clk1P22518 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Clk1P22518 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.72□□□□□ -0.37
Clk1P22518 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clk1P22518 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.71□□□□□ -0.37
Clk1P22518 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Clk1P22518 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.71□□□□□ -0.37
Clk1P22518 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clk1P22518 Gm37714-201ENSMUST00000194742 342 ntBASIC12.71□□□□□ -0.37
Clk1P22518 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.71□□□□□ -0.37
Clk1P22518 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms