Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.06□□□□□ -0.32
BdnfP21237 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BdnfP21237 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.05□□□□□ -0.32
BdnfP21237 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
BdnfP21237 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
BdnfP21237 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
BdnfP21237 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.05□□□□□ -0.32
BdnfP21237 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.05□□□□□ -0.32
BdnfP21237 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Gm5566-201ENSMUST00000116118 459 ntBASIC13.05□□□□□ -0.32
BdnfP21237 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Gm9719-201ENSMUST00000162765 543 ntBASIC13.05□□□□□ -0.32
BdnfP21237 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.05□□□□□ -0.32
BdnfP21237 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
BdnfP21237 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.05□□□□□ -0.32
BdnfP21237 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
BdnfP21237 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.05□□□□□ -0.32
BdnfP21237 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BdnfP21237 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Gm22065-201ENSMUST00000103753 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm22066-201ENSMUST00000103761 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24932-201ENSMUST00000103763 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24115-201ENSMUST00000103799 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm22190-201ENSMUST00000103827 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm22191-201ENSMUST00000103831 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24721-201ENSMUST00000103849 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm28018-201ENSMUST00000103869 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm26399-201ENSMUST00000103937 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
BdnfP21237 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Gm24158-201ENSMUST00000175263 71 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm25349-201ENSMUST00000177728 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm23616-201ENSMUST00000177797 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm25871-201ENSMUST00000177816 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24752-201ENSMUST00000178240 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24496-201ENSMUST00000178287 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm25649-201ENSMUST00000178476 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm25548-201ENSMUST00000178681 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm23147-201ENSMUST00000178841 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm26095-201ENSMUST00000179270 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm22171-201ENSMUST00000179283 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm23936-201ENSMUST00000179354 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm22619-201ENSMUST00000179516 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm25255-201ENSMUST00000179579 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24755-201ENSMUST00000179691 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm26506-201ENSMUST00000179692 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm25086-201ENSMUST00000179931 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm23243-201ENSMUST00000180047 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24659-201ENSMUST00000180212 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm24169-201ENSMUST00000180244 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm23689-201ENSMUST00000180354 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm27359-201ENSMUST00000184153 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm27785-201ENSMUST00000184268 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm27466-201ENSMUST00000184396 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm27703-201ENSMUST00000184836 110 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BdnfP21237 Gm2213-201ENSMUST00000197485 688 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.04□□□□□ -0.32
BdnfP21237 Gm5779-201ENSMUST00000218467 910 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Gm18027-201ENSMUST00000218947 619 ntBASIC13.04□□□□□ -0.32
BdnfP21237 Chchd1-203ENSMUST00000224633 557 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms