Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm18889-201ENSMUST00000174284 929 ntBASIC11.25□□□□□ -0.61
Cxcl1P12850 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cxcl1P12850 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl1P12850 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.25□□□□□ -0.61
Cxcl1P12850 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl1P12850 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl1P12850 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl1P12850 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl1P12850 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.25□□□□□ -0.61
Cxcl1P12850 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl1P12850 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gm16476-201ENSMUST00000221544 139 ntBASIC11.24□□□□□ -0.61
Cxcl1P12850 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.24□□□□□ -0.61
Cxcl1P12850 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.24□□□□□ -0.61
Cxcl1P12850 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.24□□□□□ -0.61
Cxcl1P12850 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl1P12850 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl1P12850 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cxcl1P12850 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Gm15678-201ENSMUST00000117573 960 ntBASIC11.23□□□□□ -0.61
Cxcl1P12850 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Gm27494-201ENSMUST00000184735 189 ntBASIC11.23□□□□□ -0.61
Cxcl1P12850 Gm29541-201ENSMUST00000191351 678 ntBASIC11.23□□□□□ -0.61
Cxcl1P12850 Gm33320-201ENSMUST00000192232 530 ntBASIC11.23□□□□□ -0.61
Cxcl1P12850 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.23□□□□□ -0.61
Cxcl1P12850 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cxcl1P12850 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.23□□□□□ -0.61
Cxcl1P12850 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms