Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chmp6P0C0A3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chmp6P0C0A3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chmp6P0C0A3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm8927-201ENSMUST00000181978 981 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Chmp6P0C0A3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gm42612-201ENSMUST00000197986 623 ntBASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gm43170-201ENSMUST00000199827 612 ntBASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp6P0C0A3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Gm13385-201ENSMUST00000121089 220 ntBASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Gm21854-201ENSMUST00000179901 471 ntBASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.79□□□□□ -0.04
Chmp6P0C0A3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp6P0C0A3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms