Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Mir1894-201ENSMUST00000122802 81 ntBASIC13.35□□□□□ -0.27
Hoxa4P06798 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.34□□□□□ -0.27
Hoxa4P06798 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.34□□□□□ -0.27
Hoxa4P06798 Gm11424-201ENSMUST00000121929 829 ntBASIC13.34□□□□□ -0.27
Hoxa4P06798 Gm27892-201ENSMUST00000185017 106 ntBASIC13.34□□□□□ -0.27
Hoxa4P06798 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.34□□□□□ -0.27
Hoxa4P06798 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxa4P06798 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxa4P06798 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxa4P06798 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxa4P06798 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm11478-201ENSMUST00000117851 599 ntBASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm13612-201ENSMUST00000119276 390 ntBASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm6244-201ENSMUST00000178732 841 ntBASIC13.33□□□□□ -0.28
Hoxa4P06798 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.33□□□□□ -0.28
Hoxa4P06798 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxa4P06798 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxa4P06798 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms