Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.66□□□□□ -0.06
Vti1aO89116 Mir6420-201ENSMUST00000185032 102 ntBASIC14.66□□□□□ -0.06
Vti1aO89116 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.66□□□□□ -0.06
Vti1aO89116 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vti1aO89116 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Vti1aO89116 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.66□□□□□ -0.06
Vti1aO89116 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.66□□□□□ -0.06
Vti1aO89116 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Vti1aO89116 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vti1aO89116 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Gm24420-201ENSMUST00000176676 59 ntBASIC14.65□□□□□ -0.06
Vti1aO89116 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.65□□□□□ -0.06
Vti1aO89116 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.65□□□□□ -0.06
Vti1aO89116 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.65□□□□□ -0.06
Vti1aO89116 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.65□□□□□ -0.06
Vti1aO89116 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.65□□□□□ -0.06
Vti1aO89116 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1aO89116 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1aO89116 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Vti1aO89116 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Vti1aO89116 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.64□□□□□ -0.07
Vti1aO89116 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Vti1aO89116 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 Gm27847-201ENSMUST00000183711 107 ntBASIC14.64□□□□□ -0.07
Vti1aO89116 Gm27375-201ENSMUST00000183799 107 ntBASIC14.64□□□□□ -0.07
Vti1aO89116 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.64□□□□□ -0.07
Vti1aO89116 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vti1aO89116 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.64□□□□□ -0.07
Vti1aO89116 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1aO89116 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.64□□□□□ -0.07
Vti1aO89116 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vti1aO89116 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.63□□□□□ -0.07
Vti1aO89116 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.63□□□□□ -0.07
Vti1aO89116 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1aO89116 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms