Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.3■□□□□ 0.36
Ubr1O70481 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubr1O70481 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ubr1O70481 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ubr1O70481 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ubr1O70481 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.29■□□□□ 0.36
Ubr1O70481 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Gm37466-201ENSMUST00000195692 652 ntBASIC17.29■□□□□ 0.36
Ubr1O70481 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ubr1O70481 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.29■□□□□ 0.36
Ubr1O70481 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.29■□□□□ 0.36
Ubr1O70481 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.29■□□□□ 0.36
Ubr1O70481 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ubr1O70481 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.28■□□□□ 0.36
Ubr1O70481 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.28■□□□□ 0.36
Ubr1O70481 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.28■□□□□ 0.36
Ubr1O70481 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ubr1O70481 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ubr1O70481 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.28■□□□□ 0.36
Ubr1O70481 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ubr1O70481 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Gm11531-201ENSMUST00000117614 555 ntBASIC17.28■□□□□ 0.36
Ubr1O70481 Gm11439-201ENSMUST00000118598 409 ntBASIC17.28■□□□□ 0.36
Ubr1O70481 Gm8885-201ENSMUST00000189382 598 ntBASIC17.28■□□□□ 0.36
Ubr1O70481 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.28■□□□□ 0.36
Ubr1O70481 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ubr1O70481 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ubr1O70481 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.27■□□□□ 0.36
Ubr1O70481 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ubr1O70481 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC17.27■□□□□ 0.35
Ubr1O70481 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ubr1O70481 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.27■□□□□ 0.35
Ubr1O70481 AA914427-201ENSMUST00000193194 1166 ntBASIC17.27■□□□□ 0.35
Ubr1O70481 Gm8099-201ENSMUST00000200510 742 ntBASIC17.27■□□□□ 0.35
Ubr1O70481 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.27■□□□□ 0.35
Ubr1O70481 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.27■□□□□ 0.35
Ubr1O70481 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.27■□□□□ 0.35
Ubr1O70481 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ubr1O70481 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.26■□□□□ 0.35
Ubr1O70481 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ubr1O70481 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ubr1O70481 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms