Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Lsm2O35900 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm2O35900 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lsm2O35900 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm2O35900 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm2O35900 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lsm2O35900 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Lsm2O35900 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm2O35900 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.08□□□□□ -0.48
Lsm2O35900 Gm14140-201ENSMUST00000119999 995 ntBASIC12.08□□□□□ -0.48
Lsm2O35900 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.08□□□□□ -0.48
Lsm2O35900 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm2O35900 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.08□□□□□ -0.48
Lsm2O35900 Gm5364-201ENSMUST00000216789 889 ntBASIC12.08□□□□□ -0.48
Lsm2O35900 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lsm2O35900 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.08□□□□□ -0.48
Lsm2O35900 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm2O35900 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lsm2O35900 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.07□□□□□ -0.48
Lsm2O35900 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Lsm2O35900 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm2O35900 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm2O35900 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lsm2O35900 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.07□□□□□ -0.48
Lsm2O35900 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.07□□□□□ -0.48
Lsm2O35900 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.07□□□□□ -0.48
Lsm2O35900 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.07□□□□□ -0.48
Lsm2O35900 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.07□□□□□ -0.48
Lsm2O35900 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lsm2O35900 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm2O35900 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm2O35900 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms