Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.63□□□□□ -0.07
Nr1i3O35627 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.63□□□□□ -0.07
Nr1i3O35627 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Gm14701-201ENSMUST00000117156 348 ntBASIC14.62□□□□□ -0.07
Nr1i3O35627 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nr1i3O35627 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nr1i3O35627 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.61□□□□□ -0.07
Nr1i3O35627 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.61□□□□□ -0.07
Nr1i3O35627 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Nr1i3O35627 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Nr1i3O35627 Gm38294-201ENSMUST00000192831 381 ntBASIC14.61□□□□□ -0.07
Nr1i3O35627 Gm43575-201ENSMUST00000196420 516 ntBASIC14.61□□□□□ -0.07
Nr1i3O35627 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.61□□□□□ -0.07
Nr1i3O35627 Gm7775-201ENSMUST00000218871 853 ntBASIC14.61□□□□□ -0.07
Nr1i3O35627 Gm17330-201ENSMUST00000221047 165 ntBASIC14.61□□□□□ -0.07
Nr1i3O35627 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Nr1i3O35627 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nr1i3O35627 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nr1i3O35627 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm37935-201ENSMUST00000192012 982 ntBASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Gm9063-201ENSMUST00000223299 582 ntBASIC14.6□□□□□ -0.07
Nr1i3O35627 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nr1i3O35627 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms