Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc1a6O35544 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.39□□□□□ -0.27
Slc1a6O35544 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc1a6O35544 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Gm9824-201ENSMUST00000178707 561 ntBASIC13.38□□□□□ -0.27
Slc1a6O35544 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.38□□□□□ -0.27
Slc1a6O35544 Dupd1-202ENSMUST00000224735 548 ntBASIC13.38□□□□□ -0.27
Slc1a6O35544 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Slc1a6O35544 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.38□□□□□ -0.27
Slc1a6O35544 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc1a6O35544 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc1a6O35544 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.37□□□□□ -0.27
Slc1a6O35544 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Gm18766-201ENSMUST00000189811 808 ntBASIC13.37□□□□□ -0.27
Slc1a6O35544 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.37□□□□□ -0.27
Slc1a6O35544 Gm16476-201ENSMUST00000221544 139 ntBASIC13.37□□□□□ -0.27
Slc1a6O35544 Mzt1-203ENSMUST00000227948 952 ntBASIC13.37□□□□□ -0.27
Slc1a6O35544 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Slc1a6O35544 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Slc1a6O35544 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc1a6O35544 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc1a6O35544 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc1a6O35544 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms