Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mir497b-201ENSMUST00000093601 125 ntBASIC14.13□□□□□ -0.15
Ebf3O08791 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ebf3O08791 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ebf3O08791 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ebf3O08791 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.13□□□□□ -0.15
Ebf3O08791 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Ebf3O08791 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ebf3O08791 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.12□□□□□ -0.15
Ebf3O08791 Gm12485-201ENSMUST00000119641 291 ntBASIC14.12□□□□□ -0.15
Ebf3O08791 Gm27847-201ENSMUST00000183711 107 ntBASIC14.12□□□□□ -0.15
Ebf3O08791 Gm27375-201ENSMUST00000183799 107 ntBASIC14.12□□□□□ -0.15
Ebf3O08791 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.12□□□□□ -0.15
Ebf3O08791 Gm7561-201ENSMUST00000211203 886 ntBASIC14.12□□□□□ -0.15
Ebf3O08791 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.12□□□□□ -0.15
Ebf3O08791 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
Ebf3O08791 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ebf3O08791 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ebf3O08791 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ebf3O08791 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.11□□□□□ -0.15
Ebf3O08791 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.11□□□□□ -0.15
Ebf3O08791 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.11□□□□□ -0.15
Ebf3O08791 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.11□□□□□ -0.15
Ebf3O08791 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Gm27772-201ENSMUST00000184900 187 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 Gm45784-201ENSMUST00000188360 142 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ebf3O08791 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Gm6091-201ENSMUST00000098307 165 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ebf3O08791 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ebf3O08791 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.11□□□□□ -0.15
Ebf3O08791 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ebf3O08791 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.1□□□□□ -0.15
Ebf3O08791 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.1□□□□□ -0.15
Ebf3O08791 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.1□□□□□ -0.15
Ebf3O08791 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ebf3O08791 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf3O08791 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms