Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm15372-201ENSMUST00000120729 834 ntBASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim55G3X8Y1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim55G3X8Y1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Gm8655-201ENSMUST00000221159 852 ntBASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim55G3X8Y1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Gm13884-201ENSMUST00000118103 829 ntBASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms