Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm6152-201ENSMUST00000151704 340 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm8652-201ENSMUST00000181363 964 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm38671-201ENSMUST00000200573 130 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Gm17150-201ENSMUST00000165577 381 ntBASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Gm18187-201ENSMUST00000196476 984 ntBASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb9E9Q5G2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Gm11814-201ENSMUST00000119515 929 ntBASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb9E9Q5G2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb9E9Q5G2 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms