Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Clca3bE9PUL3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Gm6152-201ENSMUST00000151704 340 ntBASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.59□□□□□ -0.07
Clca3bE9PUL3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Clca3bE9PUL3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Gm17150-201ENSMUST00000165577 381 ntBASIC14.58□□□□□ -0.08
Clca3bE9PUL3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clca3bE9PUL3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Itm2b-204ENSMUST00000228637 783 ntBASIC14.57□□□□□ -0.08
Clca3bE9PUL3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clca3bE9PUL3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms