Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Gm27430-201ENSMUST00000184585 107 ntBASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Gm44333-201ENSMUST00000197168 107 ntBASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm28043E0CXC2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.65□□□□□ -0.22
Gm28043E0CXC2 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gm28043E0CXC2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gm28043E0CXC2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm25144-201ENSMUST00000179561 110 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm25352-201ENSMUST00000179815 110 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gm28043E0CXC2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.64□□□□□ -0.23
Gm28043E0CXC2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gm28043E0CXC2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms