Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Gm18027-201ENSMUST00000218947 619 ntBASIC10.97□□□□□ -0.65
Gm12887B1AVM1 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gm12887B1AVM1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Gm11452-201ENSMUST00000122376 690 ntBASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gm12887B1AVM1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gm12887B1AVM1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms