Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav12d-1A0N8R0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm18766-201ENSMUST00000189811 808 ntBASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm16476-201ENSMUST00000221544 139 ntBASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav12d-1A0N8R0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm15678-201ENSMUST00000117573 960 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm27494-201ENSMUST00000184735 189 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm33320-201ENSMUST00000192232 530 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm10175-201ENSMUST00000086013 645 ntBASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav12d-1A0N8R0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms