Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lnp1A0A1B0GSK3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm29667-201ENSMUST00000190817 490 ntBASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm15240-201ENSMUST00000118156 720 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Mir8102-201ENSMUST00000184148 139 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Mir7023-201ENSMUST00000185093 64 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Lnp1A0A1B0GSK3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lnp1A0A1B0GSK3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms