Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm27300-201ENSMUST00000184085 97 ntBASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm27335-201ENSMUST00000184758 97 ntBASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm28659-201ENSMUST00000188013 759 ntBASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms