Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav5-4A0A075B652 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Mir1897-201ENSMUST00000122581 272 ntBASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Gm33320-201ENSMUST00000192232 530 ntBASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5-4A0A075B652 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5-4A0A075B652 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5-4A0A075B652 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms