Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.45□□□□□ -0.74
PdfS4R2K0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.45□□□□□ -0.74
PdfS4R2K0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.45□□□□□ -0.74
PdfS4R2K0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
PdfS4R2K0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
PdfS4R2K0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.44□□□□□ -0.74
PdfS4R2K0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.44□□□□□ -0.74
PdfS4R2K0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
PdfS4R2K0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.44□□□□□ -0.74
PdfS4R2K0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PdfS4R2K0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.43□□□□□ -0.74
PdfS4R2K0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PdfS4R2K0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms