Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Mir497b-201ENSMUST00000093601 125 ntBASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk1bQ9Z2C6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gm18057-201ENSMUST00000208220 503 ntBASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Psmb5-202ENSMUST00000227257 622 ntBASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Mir125a-201ENSMUST00000083545 68 ntBASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.61□□□□□ -0.39
Upk1bQ9Z2C6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm27631-201ENSMUST00000184163 466 ntBASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1bQ9Z2C6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms