Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CcsQ9WU84 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CcsQ9WU84 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CcsQ9WU84 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CcsQ9WU84 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CcsQ9WU84 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.58□□□□□ -0.72
CcsQ9WU84 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.58□□□□□ -0.72
CcsQ9WU84 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Mir1895-201ENSMUST00000122615 79 ntBASIC10.58□□□□□ -0.72
CcsQ9WU84 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Gm27494-201ENSMUST00000184735 189 ntBASIC10.58□□□□□ -0.72
CcsQ9WU84 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
CcsQ9WU84 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CcsQ9WU84 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.57□□□□□ -0.72
CcsQ9WU84 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.57□□□□□ -0.72
CcsQ9WU84 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gm11025-201ENSMUST00000140773 466 ntBASIC10.57□□□□□ -0.72
CcsQ9WU84 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.57□□□□□ -0.72
CcsQ9WU84 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.57□□□□□ -0.72
CcsQ9WU84 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.57□□□□□ -0.72
CcsQ9WU84 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Matn2-203ENSMUST00000226766 3252 ntBASIC10.57□□□□□ -0.72
CcsQ9WU84 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CcsQ9WU84 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CcsQ9WU84 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CcsQ9WU84 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms