Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn8aQ9WTU3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Gm27514-201ENSMUST00000183692 110 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Gm43118-201ENSMUST00000199149 775 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn8aQ9WTU3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn8aQ9WTU3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm10146-201ENSMUST00000072739 309 ntBASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm26927-201ENSMUST00000182385 965 ntBASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Gm45784-201ENSMUST00000188360 142 ntBASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.58□□□□□ -0.24
Scn8aQ9WTU3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms