Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Gm29667-201ENSMUST00000190817 490 ntBASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tubb3Q9ERD7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tubb3Q9ERD7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tubb3Q9ERD7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms