Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Mir5131-201ENSMUST00000175426 93 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Gm18195-201ENSMUST00000207604 706 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Gm15590-201ENSMUST00000078419 552 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hmgn3Q9DCB1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Gm27300-201ENSMUST00000184085 97 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Gm27335-201ENSMUST00000184758 97 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Gm27628-201ENSMUST00000184911 107 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmgn3Q9DCB1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms