Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm24589-201ENSMUST00000116692 94 ntBASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm9103-201ENSMUST00000119371 405 ntBASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm45167-201ENSMUST00000208007 322 ntBASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm9182-201ENSMUST00000217829 639 ntBASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gm6550-201ENSMUST00000187574 993 ntBASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gm18246-201ENSMUST00000221023 728 ntBASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.41□□□□□ -0.42
Hmg20aQ9DC33 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm7230-201ENSMUST00000173026 815 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.4□□□□□ -0.42
Hmg20aQ9DC33 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms