Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp8Q9DB85 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Gm27243-201ENSMUST00000183964 521 ntBASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp8Q9DB85 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gm27516-201ENSMUST00000184237 98 ntBASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gm37922-201ENSMUST00000195596 455 ntBASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gm44364-201ENSMUST00000198368 141 ntBASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp8Q9DB85 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rrp8Q9DB85 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rrp8Q9DB85 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rrp8Q9DB85 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rrp8Q9DB85 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rrp8Q9DB85 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.27□□□□□ -0.29
Rrp8Q9DB85 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms