Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tubb4aQ9D6F9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tubb4aQ9D6F9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tubb4aQ9D6F9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.65□□□□□ -0.06
Tubb4aQ9D6F9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tubb4aQ9D6F9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms