Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm14859-201ENSMUST00000117752 357 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm11764-201ENSMUST00000120221 623 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm27300-201ENSMUST00000184085 97 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm27335-201ENSMUST00000184758 97 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm6376-201ENSMUST00000209407 580 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Gm45747-201ENSMUST00000212203 999 ntBASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sf3a3Q9D554 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3a3Q9D554 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Gm7153-201ENSMUST00000117092 455 ntBASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.74□□□□□ -0.21
Sf3a3Q9D554 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3a3Q9D554 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms