Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rpusd4Q9CWX4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm8410-201ENSMUST00000117225 605 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm6222-201ENSMUST00000120787 396 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm25927-201ENSMUST00000175058 117 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Auts2-212ENSMUST00000178555 309 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm27306-201ENSMUST00000183970 107 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rpusd4Q9CWX4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Gm24543-201ENSMUST00000103867 82 ntBASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Gm25925-201ENSMUST00000158314 306 ntBASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Gm27533-201ENSMUST00000183800 152 ntBASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Gm27631-201ENSMUST00000184163 466 ntBASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Mir7023-201ENSMUST00000185093 64 ntBASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 AA619741-201ENSMUST00000195095 646 ntBASIC11.55□□□□□ -0.56
Rpusd4Q9CWX4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms