Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl54Q9CPW3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Gm16198-201ENSMUST00000118766 670 ntBASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mrpl54Q9CPW3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl54Q9CPW3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl54Q9CPW3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl54Q9CPW3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl54Q9CPW3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl54Q9CPW3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms