Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Krt88Q9CPR6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt88Q9CPR6 BC001981-202ENSMUST00000191393 1545 ntBASIC12.27□□□□□ -0.44
Krt88Q9CPR6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Krt88Q9CPR6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Krt88Q9CPR6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Krt88Q9CPR6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Krt88Q9CPR6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Gm27525-201ENSMUST00000184465 107 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Gm17968-201ENSMUST00000194902 784 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Gm5364-201ENSMUST00000216789 889 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Krt88Q9CPR6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Krt88Q9CPR6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Krt88Q9CPR6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms