Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm5187-201ENSMUST00000117317 991 ntBASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm44397-201ENSMUST00000195950 113 ntBASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm7399-201ENSMUST00000032395 858 ntBASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm5370-201ENSMUST00000187187 574 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Mir8109-201ENSMUST00000184375 117 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Prpf8Q99PV0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prpf8Q99PV0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prpf8Q99PV0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prpf8Q99PV0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prpf8Q99PV0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Prpf8Q99PV0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.15□□□□□ -0.63
Prpf8Q99PV0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Proscos-202ENSMUST00000178990 666 ntBASIC11.14□□□□□ -0.63
Prpf8Q99PV0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.14□□□□□ -0.63
Prpf8Q99PV0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prpf8Q99PV0 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms