Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.36□□□□□ -0.27
Trim8Q99PJ2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Gm18737-201ENSMUST00000173594 937 ntBASIC13.36□□□□□ -0.27
Trim8Q99PJ2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Gm45453-201ENSMUST00000211758 853 ntBASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim8Q99PJ2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gm13365-201ENSMUST00000121188 973 ntBASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Mir497b-201ENSMUST00000093601 125 ntBASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim8Q99PJ2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Rprl2-201ENSMUST00000157150 290 ntBASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Gm37714-201ENSMUST00000194742 342 ntBASIC13.34□□□□□ -0.27
Trim8Q99PJ2 AA619741-201ENSMUST00000195095 646 ntBASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms